C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RFX family member 8, lacking RFX DNA binding domain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000481179 RFX8-003 ENSG00000196460 9606 - 2:101397361-101474703 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastMuscleOvaryPlacentaTestisENST00000481179
Transcript ID Adipose Breast Muscle Ovary Placenta Testis
ENST00000481179 0.066±0.00 0.152±0.00 0.153±0.00 0.243±0.02 0.066±0.04 0.671±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TG CIL_0008TG_0001 VISTA 2:100809636-101413030
CIL_0004QX CIL_0004QX_0001 CGP 2:101345551-101474703

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000151913 Rfx8-001 protein_coding Mus_musculus 0 634

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