C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 2, regulatory subunit B, delta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000482010 PPP2R2D-005 ENSG00000175470 9606 + 10:131901266-131956555 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastKidneyLiverLungMuscleOvaryPlacentaTestisENST00000482010
Transcript ID Adipose Adrenal Bladder Brain Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000482010 2.280±0.00 2.090±0.00 1.217±0.00 3.076±0.00 2.919±0.00 2.194±0.20 1.175±0.00 5.081±0.00 8.792±0.00 3.707±0.41 1.985±0.58 3.552±1.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000478 CIL_000478_0002 CGP 10:131900644-131981931

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000155672 Ppp2r2d-003 protein_coding Mus_musculus 0 950
ENSMUST00000041097 Ppp2r2d-001 protein_coding Mus_musculus 0 950
ENSMUST00000172764 Ppp2r2d-009 nonsense_mediated_decay Mus_musculus 0 918
ENSMUST00000174090 Ppp2r2d-008 protein_coding Mus_musculus 0 545
ENSDART00000028983 PPP2R2A (2 of 2)-201 protein_coding Danio_rerio 0 344
ENSDART00000155816 PPP2R2A (2 of 2)-001 protein_coding Danio_rerio 0 344
ENSMUST00000152104 Ppp2r2d-005 processed_transcript Mus_musculus 0 329
ENSMUST00000140047 Ppp2r2d-006 processed_transcript Mus_musculus 0 298
ENSMUST00000148453 Ppp2r2d-004 nonsense_mediated_decay Mus_musculus 0 267
ENSMUST00000128157 Ppp2r2d-002 retained_intron Mus_musculus 0 239
ENSMUST00000136824 Ppp2r2d-007 nonsense_mediated_decay Mus_musculus 0 235

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