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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | heat shock 60kDa protein 1 (chaperonin) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000482167  |
HSPD1-004 |
ENSG00000144381 |
9606 | - |
2:197493320-197494474  |
retained_intron |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007X7 | CIL_0007X7_0001 | VISTA | 2:196975905-197591368 |
| CIL_0002KH | CIL_0002KH_0001 | CGP | 2:197453423-197516737 |
| CIL_00042Q | CIL_00042Q_0002 | CGP | 2:197486581-197516737 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000027123
|
Hspd1-001 | protein_coding | Mus_musculus | 0 | 326 |
|
ENSMUST00000119713
|
Gm12141-001 | processed_pseudogene | Mus_musculus | 0 | 315 |
|
ENSMUST00000121815
|
Gm12725-001 | processed_pseudogene | Mus_musculus | 0 | 287 |
|
ENSMUST00000189810
|
RP24-292D18.1-001 | processed_pseudogene | Mus_musculus | 0 | 270 |
|
ENSMUST00000189212
|
RP23-274N9.1-001 | processed_pseudogene | Mus_musculus | 0 | 265 |
|
ENSMUST00000122013
|
Gm12608-001 | processed_pseudogene | Mus_musculus | 0 | 252 |
|
ENSMUST00000169520
|
Gm17101-001 | processed_pseudogene | Mus_musculus | 2e-32 | 143 |
