C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12725
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121815 Gm12725-001 ENSMUSG00000081189 10090 - 4:106136111-106137778 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121815
Transcript ID Adrenal Bladder Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121815 0.331±0.00 0.113±0.00 0.051±0.00 0.032±0.00 0.047±0.02 0.070±0.00 0.059±0.03 0.295±0.15 0.039±0.02 0.378±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084O CIL_00084O_0002 VISTA 4:105560013-106163946

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000345042 HSPD1-201 protein_coding Homo_sapiens 0 1857
ENST00000388967 HSPD1P6-001 transcribed_processed_pseudogene Homo_sapiens 0 1557
ENST00000388968 HSPD1-001 protein_coding Homo_sapiens 0 1857
ENST00000400121 HSPD1P8-001 processed_pseudogene Homo_sapiens 0 1195
ENST00000420325 HSPD1P9-001 processed_pseudogene Homo_sapiens 0 472
ENST00000429127 RP11-69M1.3-001 processed_pseudogene Homo_sapiens 0 959
ENST00000447985 HSPD1P7-001 processed_pseudogene Homo_sapiens 0 800
ENST00000482167 HSPD1-004 retained_intron Homo_sapiens 0 287
ENST00000491249 HSPD1-003 retained_intron Homo_sapiens 0 673
ENST00000503199 HSPD1P1-001 processed_pseudogene Homo_sapiens 0 1722
ENST00000508643 HSPD1P11-001 processed_pseudogene Homo_sapiens 0 584
ENST00000511127 HSPD1P5-001 processed_pseudogene Homo_sapiens 0 1607
ENST00000530524 HSPD1P2-001 processed_pseudogene Homo_sapiens 0 1362
ENST00000533477 HSPD1P3-001 processed_pseudogene Homo_sapiens 0 1345
ENST00000547203 RP11-153M3.1-001 processed_pseudogene Homo_sapiens 0 1677

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