C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: mutS homolog 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000482280 MSH5-019 ENSG00000204410 9606 + 6:31740005-31746331 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000482280
Transcript ID Muscle
ENST00000482280 0.848±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000172536 Msh5-005 nonsense_mediated_decay Mus_musculus 0 725
ENSMUST00000174603 Msh5-007 nonsense_mediated_decay Mus_musculus 0 725
ENSMUST00000097338 Msh5-008 protein_coding Mus_musculus 0 725
ENSMUST00000007250 Msh5-001 protein_coding Mus_musculus 0 725
ENSMUST00000165329 Msh5-002 retained_intron Mus_musculus 0 702
ENSMUST00000174556 Msh5-004 nonsense_mediated_decay Mus_musculus 0 649
ENSMUST00000174741 Msh5-012 retained_intron Mus_musculus 0 647
ENSMUST00000116286 Stk40-201 protein_coding Mus_musculus 0.00002 55
ENSMUST00000127092 Stk40-002 processed_transcript Mus_musculus 0.00002 55

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