C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tRNA methyltransferase 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156161 Trmt13-002 ENSMUSG00000033439 10090 - 3:116584124-116594887 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaENSMUST00000156161
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000156161 3.146±0.55 2.000±0.60 2.314±0.34 3.728±0.24 3.104±0.42 1.991±0.45 0.863±0.39 2.296±1.09 2.555±0.46 2.084±0.52 2.278±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007EW CIL_0007EW_0002 CGP 3:116513070-116583134
CIL_0006G0 CIL_0006G0_0002 CGP 3:116562973-116614587

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370139 TRMT13-005 protein_coding Homo_sapiens 0 429
ENST00000370141 TRMT13-001 protein_coding Homo_sapiens 0 955
ENST00000370143 TRMT13-003 protein_coding Homo_sapiens 0 318
ENST00000482437 TRMT13-002 nonsense_mediated_decay Homo_sapiens 0 551

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