C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000482574 RP11-79E3.1-001 ENSG00000239983 9606 + 4:33968174-33968526 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastLungMuscleTestisENST00000482574
Transcript ID Adipose Adrenal Brain Breast Lung Muscle Testis
ENST00000482574 0.089±0.00 0.188±0.00 0.099±0.00 0.048±0.00 0.135±0.00 0.042±0.00 0.085±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TS CIL_0002TS_0002 CGP 4:30720415-36244509

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086596 Rpl31-ps9-001 processed_pseudogene Mus_musculus 0 351
ENSMUST00000119898 Rpl31-ps11-001 processed_pseudogene Mus_musculus 0 346
ENSMUST00000181935 Rpl31-ps8-001 processed_pseudogene Mus_musculus 0 346
ENSMUST00000179954 Rpl31-203 protein_coding Mus_musculus 0 346
ENSMUST00000178079 Rpl31-202 protein_coding Mus_musculus 0 346
ENSMUST00000086535 Rpl31-201 protein_coding Mus_musculus 0 346
ENSMUST00000181857 Rpl31-ps15-001 processed_pseudogene Mus_musculus 0 289

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