C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L31, pseudogene 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000086596 Rpl31-ps9-001 ENSMUSG00000094122 10090 - 1:129801387-129801764 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainLiverMuscleOvaryPlacentaTestisENSMUST00000086596
Transcript ID Adipose Bladder Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000086596 0.161±0.00 146.709±89.28 120.317±37.22 157.738±196.35 0.203±0.02 0.614±0.32 0.247±0.09 0.155±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006VZ CIL_0006VZ_0002 CGP 1:128588199-130219278
CIL_0007SW CIL_0007SW_0002 VISTA 1:129654812-130256885

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000075402 rpl31-201 protein_coding Danio_rerio 0 283
ENSDART00000149851 rpl31-002 protein_coding Danio_rerio 0 283
ENSDART00000149554 rpl31-001 protein_coding Danio_rerio 0 283
ENSDART00000148688 rpl31-003 retained_intron Danio_rerio 0 261
ENSDART00000148984 rpl31-004 retained_intron Danio_rerio 2e-26 122
ENST00000264258 RPL31-001 protein_coding Homo_sapiens 0 521
ENST00000406329 RPL31P28-001 processed_pseudogene Homo_sapiens 0 333
ENST00000409000 RPL31-006 protein_coding Homo_sapiens 0 366
ENST00000409028 RPL31-007 protein_coding Homo_sapiens 0 468
ENST00000409038 RPL31-008 protein_coding Homo_sapiens 0 470
ENST00000409320 RPL31-002 protein_coding Homo_sapiens 0 468
ENST00000409650 RPL31-009 protein_coding Homo_sapiens 0 472
ENST00000409711 RPL31-004 protein_coding Homo_sapiens 0 366
ENST00000409733 RPL31-010 protein_coding Homo_sapiens 0 521
ENST00000419276 RPL31-003 nonsense_mediated_decay Homo_sapiens 0 366
ENST00000422565 RPL31P63-001 processed_pseudogene Homo_sapiens 0 460
ENST00000426558 RPL31P11-002 processed_transcript Homo_sapiens 0 438
ENST00000427776 RP11-458F8.3-001 processed_pseudogene Homo_sapiens 0 357
ENST00000431058 RPL31P35-001 processed_pseudogene Homo_sapiens 0 425
ENST00000431088 AC016712.2-001 processed_pseudogene Homo_sapiens 0 472
ENST00000441435 RPL31-011 protein_coding Homo_sapiens 0 405
ENST00000441577 RP11-560I19.2-001 processed_pseudogene Homo_sapiens 0 407
ENST00000447680 RP11-346D6.4-001 processed_pseudogene Homo_sapiens 0 414
ENST00000449702 AC104306.1-001 processed_pseudogene Homo_sapiens 0 387
ENST00000454082 RPL31P11-001 transcribed_processed_pseudogene Homo_sapiens 0 438
ENST00000455434 RP11-420H19.3-001 processed_pseudogene Homo_sapiens 0 385
ENST00000456292 RPL31-005 protein_coding Homo_sapiens 0 468
ENST00000462248 RP11-147I3.1-001 transcribed_processed_pseudogene Homo_sapiens 0 394
ENST00000473673 RP11-364M6.1-001 processed_pseudogene Homo_sapiens 0 438
ENST00000480540 RP11-112J1.1-001 processed_pseudogene Homo_sapiens 0 464
ENST00000482574 RP11-79E3.1-001 processed_pseudogene Homo_sapiens 0 351
ENST00000487111 RP11-147I3.1-003 processed_transcript Homo_sapiens 0 270
ENST00000490759 RPL31P49-001 processed_pseudogene Homo_sapiens 0 440
ENST00000496160 RPL31P61-001 processed_pseudogene Homo_sapiens 0 440
ENST00000498412 RP1-102E24.1-001 processed_pseudogene Homo_sapiens 0 453
ENST00000518463 RP11-267M23.6-001 processed_pseudogene Homo_sapiens 0 329
ENST00000525104 RP11-147I3.1-002 processed_transcript Homo_sapiens 0 394
ENST00000529570 RP11-147I3.1-004 processed_transcript Homo_sapiens 0 394

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