C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L31, pseudogene 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000181857 Rpl31-ps15-001 ENSMUSG00000097304 10090 + 3:37734730-37735104 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENSMUST00000181857
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000181857 0.205±0.00 0.178±0.10 0.204±0.09 0.494±0.00 0.629±0.00 0.167±0.00 0.150±0.00 0.164±0.06 0.433±0.12 0.937±1.14 0.926±1.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007V2 CIL_0007V2_0002 VISTA 3:37371698-37974083
CIL_00099R CIL_00099R_0002 VISTA 3:37594700-38198826

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000075402 rpl31-201 protein_coding Danio_rerio 0 211
ENSDART00000149851 rpl31-002 protein_coding Danio_rerio 0 211
ENSDART00000149554 rpl31-001 protein_coding Danio_rerio 0 211
ENSDART00000148688 rpl31-003 retained_intron Danio_rerio 0 198
ENSDART00000148984 rpl31-004 retained_intron Danio_rerio 6e-16 88
ENST00000264258 RPL31-001 protein_coding Homo_sapiens 0 440
ENST00000406329 RPL31P28-001 processed_pseudogene Homo_sapiens 0 283
ENST00000409000 RPL31-006 protein_coding Homo_sapiens 0 324
ENST00000409028 RPL31-007 protein_coding Homo_sapiens 0 392
ENST00000409038 RPL31-008 protein_coding Homo_sapiens 0 392
ENST00000409320 RPL31-002 protein_coding Homo_sapiens 0 392
ENST00000409650 RPL31-009 protein_coding Homo_sapiens 0 392
ENST00000409711 RPL31-004 protein_coding Homo_sapiens 0 324
ENST00000409733 RPL31-010 protein_coding Homo_sapiens 0 440
ENST00000413849 RPL31P2-001 processed_pseudogene Homo_sapiens 0 374
ENST00000419276 RPL31-003 nonsense_mediated_decay Homo_sapiens 0 324
ENST00000422565 RPL31P63-001 processed_pseudogene Homo_sapiens 0 390
ENST00000426558 RPL31P11-002 processed_transcript Homo_sapiens 0 357
ENST00000427776 RP11-458F8.3-001 processed_pseudogene Homo_sapiens 0 300
ENST00000431058 RPL31P35-001 processed_pseudogene Homo_sapiens 0 357
ENST00000431088 AC016712.2-001 processed_pseudogene Homo_sapiens 0 396
ENST00000441435 RPL31-011 protein_coding Homo_sapiens 0 355
ENST00000441577 RP11-560I19.2-001 processed_pseudogene Homo_sapiens 0 361
ENST00000447680 RP11-346D6.4-001 processed_pseudogene Homo_sapiens 0 344
ENST00000449702 AC104306.1-001 processed_pseudogene Homo_sapiens 0 302
ENST00000454082 RPL31P11-001 transcribed_processed_pseudogene Homo_sapiens 0 357
ENST00000455434 RP11-420H19.3-001 processed_pseudogene Homo_sapiens 0 305
ENST00000456292 RPL31-005 protein_coding Homo_sapiens 0 392
ENST00000462248 RP11-147I3.1-001 transcribed_processed_pseudogene Homo_sapiens 0 342
ENST00000473673 RP11-364M6.1-001 processed_pseudogene Homo_sapiens 0 374
ENST00000480540 RP11-112J1.1-001 processed_pseudogene Homo_sapiens 0 394
ENST00000482574 RP11-79E3.1-001 processed_pseudogene Homo_sapiens 0 289
ENST00000487111 RP11-147I3.1-003 processed_transcript Homo_sapiens 0 246
ENST00000490759 RPL31P49-001 processed_pseudogene Homo_sapiens 0 387
ENST00000496160 RPL31P61-001 processed_pseudogene Homo_sapiens 0 370
ENST00000498412 RP1-102E24.1-001 processed_pseudogene Homo_sapiens 0 374
ENST00000518463 RP11-267M23.6-001 processed_pseudogene Homo_sapiens 0 276
ENST00000525104 RP11-147I3.1-002 processed_transcript Homo_sapiens 0 342
ENST00000529570 RP11-147I3.1-004 processed_transcript Homo_sapiens 0 342

Loading