C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ribosomal protein S27-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000482846 RPS27L-002 ENSG00000185088 9606 - 15:63153853-63157477 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLungOvaryTestisENST00000482846
Transcript ID Brain Lung Ovary Testis
ENST00000482846 1.119±0.00 1.885±0.00 3.894±0.00 0.331±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094O CIL_00094O_0001 VISTA 15:62748846-63351985
CIL_00098V CIL_00098V_0001 VISTA 15:62790346-63394142

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000143044 Rps27l-005 processed_transcript Mus_musculus 2e-24 119
ENSMUST00000127896 Rps27l-002 protein_coding Mus_musculus 7e-24 117
ENSMUST00000040917 Rps27l-001 protein_coding Mus_musculus 7e-24 117
ENSMUST00000123931 Rps27l-006 retained_intron Mus_musculus 2e-23 115
ENSMUST00000146573 Rps27l-004 protein_coding Mus_musculus 0.000004 58
ENSMUST00000147394 Rps27l-003 nonsense_mediated_decay Mus_musculus 0.000004 58

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