C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: paralemmin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000483909 PALM2-004 ENSG00000243444 9606 + 9:109780403-109943623 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GE CIL_0001GE_0001 CGP 9:109375466-109946703
CIL_00016E CIL_00016E_0001 CGP 9:109640788-110172512

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008360 IEA regulation of cell shape
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102904 Palm2-001 protein_coding Mus_musculus 0 1733
ENSMUST00000102905 Palm2-003 protein_coding Mus_musculus 0 1642
ENSMUST00000142556 Palm2-002 nonsense_mediated_decay Mus_musculus 0 953
ENSMUST00000126465 Palm2Akap2-003 nonsense_mediated_decay Mus_musculus 0 835
ENSMUST00000098066 Palm2Akap2-002 nonsense_mediated_decay Mus_musculus 0 608
ENSMUST00000131201 Palm2-004 retained_intron Mus_musculus 0 501
ENSMUST00000150412 Palm2Akap2-001 protein_coding Mus_musculus 0 442

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