C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000483984 BAP1-009 ENSG00000163930 9606 - 3:52406646-52409878 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungENST00000483984
Transcript ID Lung
ENST00000483984 3.595±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WP CIL_0007WP_0001 VISTA 3:52127966-52731115

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000190788 Bap1-002 retained_intron Mus_musculus 0 599
ENSMUST00000022458 Bap1-001 protein_coding Mus_musculus 0 599
ENSMUST00000189834 Bap1-003 retained_intron Mus_musculus 0 547
ENSMUST00000188453 Bap1-005 nonsense_mediated_decay Mus_musculus 0 510
ENSMUST00000188714 Bap1-004 retained_intron Mus_musculus 0 198

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