C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RFX family member 8, lacking RFX DNA binding domain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000484091 RFX8-004 ENSG00000196460 9606 - 2:101421698-101474701 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLungPlacentaENST00000484091
Transcript ID Colon Lung Placenta
ENST00000484091 0.028±0.00 0.508±0.00 0.084±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TG CIL_0008TG_0001 VISTA 2:100809636-101413030
CIL_0004QX CIL_0004QX_0001 CGP 2:101345551-101474703

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000151913 Rfx8-001 protein_coding Mus_musculus 0 278

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