C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | TSEN15 tRNA splicing endonuclease subunit | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000485209  |
TSEN15-002 |
ENSG00000198860 |
9606 | + |
1:184051679-184072980  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001BM | CIL_0001BM_0002 | CGP | 1:184051677-184629020 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000213 | IEA | tRNA-intron endonuclease activity |
| GO:0006388 | IEA | tRNA splicing, via endonucleolytic cleavage and ligation |
| GO:0090502 | IEA | RNA phosphodiester bond hydrolysis, endonucleolytic |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000015124
|
Tsen15-001 | protein_coding | Mus_musculus | 0 | 372 |
|
ENSMUST00000162371
|
Tsen15-002 | protein_coding | Mus_musculus | 0 | 353 |
|
ENSMUST00000096101
|
Gm5874-201 | processed_pseudogene | Mus_musculus | 0 | 340 |
|
ENSMUST00000159717
|
Tsen15-004 | retained_intron | Mus_musculus | 0 | 287 |
|
ENSMUST00000161717
|
Tsen15-003 | retained_intron | Mus_musculus | 0 | 272 |
|
ENSMUST00000159270
|
Tsen15-005 | retained_intron | Mus_musculus | 0 | 261 |
