C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5874
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000096101 Gm5874-201 ENSMUSG00000071568 10090 + 6:18824552-18825058 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENSMUST00000096101
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000096101 0.600±0.32 0.342±0.16 0.542±0.50 0.363±0.05 0.399±0.19 0.419±0.25 0.144±0.05 0.475±0.15 0.362±0.22 2.052±1.83 0.420±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003QX CIL_0003QX_0002 CGP 6:18366478-18855751

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361641 TSEN15-001 protein_coding Homo_sapiens 0 584
ENST00000367518 TSEN15-005 retained_intron Homo_sapiens 0 340
ENST00000423085 TSEN15-006 protein_coding Homo_sapiens 0 340
ENST00000423257 TSEN15P1-001 processed_pseudogene Homo_sapiens 0 481
ENST00000457455 TSEN15-004 retained_intron Homo_sapiens 0 276
ENST00000462677 TSEN15-003 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000485209 TSEN15-002 nonsense_mediated_decay Homo_sapiens 0 340
ENST00000533373 TSEN15-007 protein_coding Homo_sapiens 0 392

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