C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: surfeit 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000485435 SURF4-002 ENSG00000148248 9606 - 9:133362868-133376099 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENST00000485435
Transcript ID Brain Ovary Placenta Testis
ENST00000485435 11.825±0.00 47.853±0.00 50.249±0.00 30.371±1.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DE CIL_0006DE_0001 CGP 9:133356552-133376166
CIL_0006DD CIL_0006DD_0001 CGP 9:133361449-133406096

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005793 IDA endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IEA Golgi apparatus
GO:0007030 IMP Golgi organization
GO:0010638 IMP positive regulation of organelle organization
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015011 Surf4-001 protein_coding Mus_musculus 0 625
ENSMUST00000153641 Surf4-003 nonsense_mediated_decay Mus_musculus 0 350

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