C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: surfeit gene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153641 Surf4-003 ENSMUSG00000014867 10090 - 2:26921962-26933383 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastLiverLungOvaryENSMUST00000153641
Transcript ID Adrenal Breast Liver Lung Ovary
ENSMUST00000153641 180.865±28.07 99.308±3.84 93.062±7.28 87.255±1.80 137.284±19.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DJ CIL_0006DJ_0002 CGP 2:26913383-26920183
CIL_0006DE CIL_0006DE_0002 CGP 2:26916367-26933928
CIL_0006DD CIL_0006DD_0002 CGP 2:26920040-26953496

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371982 SURF4-003 processed_transcript Homo_sapiens 7e-22 108
ENST00000371989 SURF4-001 protein_coding Homo_sapiens 0 566
ENST00000371991 SURF4-004 protein_coding Homo_sapiens 0 350
ENST00000465565 SURF4-006 processed_transcript Homo_sapiens 0 276
ENST00000467910 SURF4-005 processed_transcript Homo_sapiens 0 904
ENST00000485435 SURF4-002 protein_coding Homo_sapiens 0 350
ENST00000545297 SURF4-201 protein_coding Homo_sapiens 0 350
ENST00000613129 SURF4-202 protein_coding Homo_sapiens 0 566
ENST00000618229 SURF4-203 protein_coding Homo_sapiens 0 566

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