C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: surfeit gene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000015011 Surf4-001 ENSMUSG00000014867 10090 - 2:26920040-26933928 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000015011
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000015011 85.655±2.84 129.375±13.48 81.259±6.09 26.124±11.78 81.623±10.64 117.962±3.96 34.497±5.44 83.598±9.27 66.221±26.66 63.301±10.85 23.049±12.19 140.682±36.93 152.419±4.79 67.567±2.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DJ CIL_0006DJ_0002 CGP 2:26913383-26920183
CIL_0006DE CIL_0006DE_0002 CGP 2:26916367-26933928
CIL_0006DD CIL_0006DD_0002 CGP 2:26920040-26953496

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005793 IEA endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 IEA Golgi apparatus
GO:0007030 IEA Golgi organization
GO:0010638 IEA positive regulation of organelle organization
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371982 SURF4-003 processed_transcript Homo_sapiens 7e-22 108
ENST00000371989 SURF4-001 protein_coding Homo_sapiens 0 1218
ENST00000371991 SURF4-004 protein_coding Homo_sapiens 0 734
ENST00000465565 SURF4-006 processed_transcript Homo_sapiens 0 374
ENST00000467910 SURF4-005 processed_transcript Homo_sapiens 0 556
ENST00000485435 SURF4-002 protein_coding Homo_sapiens 0 625
ENST00000545297 SURF4-201 protein_coding Homo_sapiens 0 544
ENST00000613129 SURF4-202 protein_coding Homo_sapiens 0 1114
ENST00000618229 SURF4-203 protein_coding Homo_sapiens 0 1116

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