C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S7 pseudogene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000485777 RPS7P6-001 ENSG00000215278 9606 - 4:17427696-17428274 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastHeartKidneyMuscleTestisENST00000485777
Transcript ID Adrenal Breast Heart Kidney Muscle Testis
ENST00000485777 0.025±0.00 0.261±0.24 0.023±0.00 0.125±0.00 0.022±0.00 0.091±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033T CIL_00033T_0002 CGP 4:16501541-17512234

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074267 Rps7-201 protein_coding Mus_musculus 0 523
ENSMUST00000178147 Gm6472-002 processed_transcript Mus_musculus 0 512
ENSMUST00000187973 Gm6472-001 transcribed_processed_pseudogene Mus_musculus 0 507
ENSMUST00000104916 Gm9493-201 protein_coding Mus_musculus 0 507
ENSMUST00000190473 RP23-300D5.1-001 processed_pseudogene Mus_musculus 0 473
ENSMUST00000120919 Gm12900-001 processed_pseudogene Mus_musculus 0 433
ENSMUST00000119317 Gm8019-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000178086 Gm4761-201 processed_pseudogene Mus_musculus 0 390
ENSMUST00000181924 Gm21960-001 processed_pseudogene Mus_musculus 9.80909e-45 183

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