C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00033T_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000034896-ENSDARG00000037378 CGP 7955 1:21579492-21625575
GeneTranscriptPositionBiotype
ENSDARG00000034896 (ldb2b)
LIM-domain binding factor 2b 		ENSDART00000043556 (ldb2b-001) 21579492-21608918 protein_coding
ENSDARG00000037378 (qdprb1)
quinoid dihydropteridine reductase b1 		ENSDART00000054386 (qdprb1-001) 21619319-21625575 protein_coding
ENSDART00000142288 (qdprb1-002) 21619383-21625513 retained_intron

Danio rerio Ensembl (Zv9)

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CIL_00033T_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000169744-ENSG00000151552 CGP 9606 4:16501541-17512234
GeneTranscriptPositionBiotype
ENSG00000151552 (QDPR)
quinoid dihydropteridine reductase 		ENST00000281243 (QDPR-001) 17486398-17512234 protein_coding
ENST00000428702 (QDPR-002) 17486527-17512086 protein_coding
ENST00000501943 (QDPR-009) 17486800-17492513 retained_intron
ENST00000505710 (QDPR-007) 17490041-17511981 protein_coding
ENST00000507439 (QDPR-003) 17486398-17512069 nonsense_mediated_decay
ENST00000508623 (QDPR-006) 17487105-17512087 protein_coding
ENST00000511609 (QDPR-008) 17490439-17492508 retained_intron
ENST00000513615 (QDPR-010) 17460261-17512089 protein_coding
ENST00000514300 (QDPR-005) 17487170-17512206 nonsense_mediated_decay
ENSG00000169744 (LDB2)
LIM domain binding 2 		ENST00000304523 (LDB2-001) 16501541-16898809 protein_coding
ENST00000441778 (LDB2-003) 16501541-16898594 protein_coding
ENST00000502640 (LDB2-004) 16501546-16898634 protein_coding
ENST00000503153 (LDB2-017) 16512005-16653819 processed_transcript
ENST00000503829 (LDB2-018) 16585976-16626993 processed_transcript
ENST00000504189 (LDB2-009) 16750850-16898378 processed_transcript
ENST00000504886 (LDB2-015) 16585950-16726502 processed_transcript
ENST00000506732 (LDB2-010) 16585972-16898660 protein_coding
ENST00000507464 (LDB2-005) 16502042-16595875 protein_coding
ENST00000508804 (LDB2-012) 16588709-16759375 retained_intron
ENST00000508918 (LDB2-006) 16502794-16898634 nonsense_mediated_decay
ENST00000509803 (LDB2-008) 16501544-16507227 retained_intron
ENST00000510825 (LDB2-013) 16741455-16898678 processed_transcript
ENST00000512345 (LDB2-014) 16511985-16898621 nonsense_mediated_decay
ENST00000513457 (LDB2-011) 16588710-16826560 processed_transcript
ENST00000515064 (LDB2-007) 16501541-16898562 protein_coding
ENSG00000215278 (RPS7P6)
ribosomal protein S7 pseudogene 6 		ENST00000485777 (RPS7P6-001) 17427696-17428274 processed_pseudogene
ENSG00000249998 (RP11-141E13.1)
 ENST00000511735 (RP11-141E13.1-001) 16973275-17073903 lincRNA
ENSG00000250819 (RP11-576E20.1)
 ENST00000509964 (RP11-576E20.1-001) 17171757-17186059 lincRNA
ENSG00000251212 (MTND5P4)
MT-ND5 pseudogene 4 		ENST00000514978 (MTND5P4-001) 17061878-17062165 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00033T_0001ENSDARG00000034896ENSDART00000043556ENSDARG00000037378ENSDART00000054386ENSDART00000142288CIL_00033T_0002ENSG00000151552ENST00000281243ENST00000428702ENST00000501943ENST00000505710ENST00000507439ENST00000508623ENST00000511609ENST00000513615ENST00000514300ENSG00000169744ENST00000304523ENST00000441778ENST00000502640ENST00000503153ENST00000503829ENST00000504189ENST00000504886ENST00000506732ENST00000507464ENST00000508804ENST00000508918ENST00000509803ENST00000510825ENST00000512345ENST00000513457ENST00000515064ENSG00000215278ENST00000485777ENSG00000249998ENST00000511735ENSG00000250819ENST00000509964ENSG00000251212ENST00000514978
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00033T_0001ENSDARG00000034896ENSDART00000043556ENSDARG00000037378ENSDART00000054386ENSDART00000142288CIL_00033T_0002ENSG00000151552ENST00000281243ENST00000428702ENST00000501943ENST00000507439ENST00000508623ENST00000514300ENSG00000169744ENST00000304523ENST00000441778ENST00000502640ENST00000506732ENST00000507464ENST00000508918ENST00000509803ENST00000510825ENST00000512345ENST00000513457ENST00000515064ENSG00000215278ENST00000485777ENSG00000249998ENST00000511735ENSG00000250819ENST00000509964ENSG00000251212ENST00000514978
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000034896 ENSDART00000043556 N/A N/A N/A 6.519±5.55 N/A N/A 0.210±0.06 0.256±0.09 N/A N/A 0.443±0.00 N/A N/A N/A
ENSDARG00000037378 ENSDART00000054386 N/A N/A N/A 3.892±1.10 N/A N/A 4.037±1.30 4.770±0.00 1.041±0.00 N/A 2.979±0.00 N/A N/A N/A
ENSDART00000142288 N/A N/A N/A 3.141±0.82 N/A N/A 3.549±0.00 3.229±0.00 0.164±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000151552 ENST00000281243 5.112±0.00 2.460±0.00 7.550±0.00 26.564±13.99 15.136±0.00 3.064±0.00 3.815±2.55 14.846±4.52 4.446±3.98 1.721±1.29 6.783±1.27 8.923±5.51 8.648±2.67 7.014±0.00
ENST00000428702 9.633±0.00 8.356±0.00 N/A 91.482±0.00 9.682±9.02 10.275±0.00 15.010±0.00 29.333±0.00 25.783±0.00 5.386±0.00 N/A 9.545±5.00 9.464±7.71 15.138±5.36
ENST00000501943 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.024±0.00 N/A
ENST00000505710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507439 N/A N/A N/A N/A 0.646±0.00 2.720±0.00 N/A N/A 1.180±0.00 N/A N/A 3.568±0.54 8.289±0.00 N/A
ENST00000508623 11.522±0.00 9.403±0.00 N/A 122.211±0.00 31.830±0.00 8.970±0.00 N/A N/A 15.114±0.00 N/A N/A 8.311±0.00 10.461±0.00 10.134±0.72
ENST00000511609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513615 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514300 N/A N/A N/A N/A N/A N/A N/A N/A 0.429±0.00 N/A N/A N/A N/A N/A
ENSG00000169744 ENST00000304523 5.932±0.00 N/A N/A 7.864±2.69 1.949±0.00 3.606±0.00 1.458±0.78 N/A 1.016±0.00 17.286±0.00 N/A 1.128±0.00 N/A N/A
ENST00000441778 23.210±0.00 11.984±0.00 1.151±0.00 N/A 4.938±2.69 5.494±4.42 2.408±1.34 2.524±0.00 2.099±0.00 20.993±0.00 1.138±0.00 3.350±2.41 8.510±2.91 3.448±2.72
ENST00000502640 6.167±0.00 6.271±0.00 N/A 5.754±0.00 3.470±0.00 5.386±0.00 1.194±0.00 1.977±0.00 0.970±0.00 N/A 1.339±0.00 2.767±2.27 2.677±0.34 1.557±0.31
ENST00000503153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506732 N/A N/A 8.941±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507464 10.296±0.00 N/A N/A N/A N/A N/A 2.014±0.00 N/A N/A N/A 1.385±0.00 N/A N/A N/A
ENST00000508804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.333±0.00 N/A N/A N/A
ENST00000509803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.311±0.00 N/A N/A
ENST00000510825 N/A N/A 12.228±0.00 57.312±0.00 N/A 5.292±0.00 9.192±0.00 9.728±0.00 17.322±0.00 104.613±0.00 1.424±0.00 14.442±0.00 N/A N/A
ENST00000512345 N/A N/A N/A N/A N/A 1.508±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.845±0.00 N/A N/A N/A
ENST00000515064 N/A N/A 1.631±0.00 8.072±0.15 1.843±0.00 3.885±0.00 N/A N/A N/A 9.548±0.00 1.491±0.00 5.233±0.00 4.510±2.73 1.954±0.95
ENSG00000215278 ENST00000485777 N/A 0.025±0.00 N/A N/A 0.261±0.24 N/A 0.023±0.00 0.125±0.00 N/A N/A 0.022±0.00 N/A N/A 0.091±0.05
ENSG00000249998 ENST00000511735 N/A N/A N/A N/A 0.096±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.087±0.00
ENSG00000250819 ENST00000509964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.367±0.28
ENSG00000251212 ENST00000514978 N/A N/A N/A N/A N/A 0.053±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

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