C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | phosphodiesterase 6D, cGMP-specific, rod, delta | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000486044  |
PDE6D-006 |
ENSG00000156973 |
9606 | - |
2:231737422-231781263  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000899 | CIL_000899_0001 | VISTA | 2:231361987-231963495 |
| CIL_0007WD | CIL_0007WD_0001 | VISTA | 2:231362545-231967398 |
| CIL_0007FM | CIL_0007FM_0001 | CGP | 2:231706895-231786272 |
| CIL_0007FL | CIL_0007FL_0001 | CGP | 2:231732425-231809254 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000148683
|
Pde6d-003 | retained_intron | Mus_musculus | 0 | 558 |
|
ENSMUST00000146220
|
Pde6d-004 | protein_coding | Mus_musculus | 0 | 542 |
|
ENSMUST00000027444
|
Pde6d-001 | protein_coding | Mus_musculus | 0 | 542 |
|
ENSMUST00000143674
|
Pde6d-002 | nonsense_mediated_decay | Mus_musculus | 0 | 348 |
|
ENSMUST00000150653
|
Pde6d-005 | processed_transcript | Mus_musculus | 0 | 195 |
