C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TATA element modulatory factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000488010 TMF1-002 ENSG00000144747 9606 - 3:69023077-69052290 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonKidneyLungOvaryTestisENST00000488010
Transcript ID Bladder Colon Kidney Lung Ovary Testis
ENST00000488010 3.865±0.00 5.770±0.00 3.505±0.00 3.295±0.00 2.616±0.00 8.094±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001TE CIL_0001TE_0002 CGP 3:68975214-69052303
CIL_0001TD CIL_0001TD_0002 CGP 3:69019827-69080408

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IDA Golgi apparatus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124173 Tmf1-002 nonsense_mediated_decay Mus_musculus 0 3317
ENSMUST00000095664 Tmf1-001 protein_coding Mus_musculus 0 2254

Loading