C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein tyrosine phosphatase, receptor type, D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000488774 PTPRD-004 ENSG00000153707 9606 - 9:8524949-8633460 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VK CIL_0007VK_0001 VISTA 9:7795553-8396166
CIL_0003OT CIL_0003OT_0001 CGP 9:7796490-10612723
CIL_0007LL CIL_0007LL_0001 UCNEbase 9:8095704-8526809
CIL_0005UW CIL_0005UW_0002 CGP 9:8314246-12710290

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000174180 Ptprd-014 protein_coding Mus_musculus 0 562
ENSMUST00000050757 Ptprd-009 protein_coding Mus_musculus 0 520
ENSMUST00000174531 Ptprd-021 protein_coding Mus_musculus 0 520
ENSMUST00000174023 Ptprd-016 protein_coding Mus_musculus 0 484
ENSMUST00000084467 Ptprd-010 processed_transcript Mus_musculus 0 457
ENSMUST00000107287 Ptprd-002 processed_transcript Mus_musculus 0 457
ENSMUST00000098005 Ptprd-015 protein_coding Mus_musculus 0 455
ENSMUST00000174831 Ptprd-013 protein_coding Mus_musculus 0 455
ENSMUST00000173376 Ptprd-018 protein_coding Mus_musculus 0 455
ENSMUST00000107289 Ptprd-001 protein_coding Mus_musculus 0 455

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