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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | signal sequence receptor, alpha | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000489567  |
SSR1-006 |
ENSG00000124783 |
9606 | - |
6:7288682-7313174  |
protein_coding |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000817 | CIL_000817_0001 | VISTA | 6:6863717-7465821 |
| CIL_0003S7 | CIL_0003S7_0001 | CGP | 6:7107597-7347446 |
| CIL_0007T6 | CIL_0007T6_0001 | VISTA | 6:7260927-7862502 |
| CIL_00004W | CIL_00004W_0001 | CGP | 6:7268306-7389743 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005783 | IDA | endoplasmic reticulum |
| GO:0005789 | IEA | endoplasmic reticulum membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000021864
|
Ssr1-201 | protein_coding | Mus_musculus | 0 | 721 |
|
ENSMUST00000020411
|
Osbpl5-201 | protein_coding | Mus_musculus | 0.0001 | 53 |
|
ENSMUST00000137627
|
Osbpl5-003 | retained_intron | Mus_musculus | 0.0001 | 53 |
|
ENSMUST00000121409
|
Osbpl5-002 | protein_coding | Mus_musculus | 0.0001 | 53 |
|
ENSMUST00000119499
|
Osbpl5-001 | protein_coding | Mus_musculus | 0.0001 | 53 |
