C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptotagmin-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000490170 SYTL1-004 ENSG00000142765 9606 + 1:27347544-27353930 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartLungOvaryPlacentaTestisENST00000490170
Transcript ID Adrenal Brain Breast Colon Heart Lung Ovary Placenta Testis
ENST00000490170 6.829±0.00 0.247±0.00 0.707±0.00 0.300±0.00 0.200±0.00 2.715±0.00 2.212±1.15 0.776±0.00 0.520±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WN CIL_0008WN_0001 VISTA 1:27203963-27805666

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105908 Sytl1-004 protein_coding Mus_musculus 0 556
ENSMUST00000030674 Sytl1-001 protein_coding Mus_musculus 0 553
ENSMUST00000142039 Sytl1-002 processed_transcript Mus_musculus 0 549

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