C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: epithelial cell adhesion molecule
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000490733 EPCAM-005 ENSG00000119888 9606 + 2:47373775-47385210 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonHeartMuscleOvaryPlacentaTestisENST00000490733
Transcript ID Adrenal Bladder Breast Colon Heart Muscle Ovary Placenta Testis
ENST00000490733 0.111±0.00 6.105±0.00 30.736±0.00 34.207±0.00 0.118±0.00 0.047±0.00 107.148±91.57 1.530±0.71 12.319±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D2 CIL_0008D2_0001 VISTA 2:46768636-47372293
CIL_0006KU CIL_0006KU_0001 CGP 2:47345158-47562311

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000053577 Epcam-201 protein_coding Mus_musculus 0 518

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