C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 2, regulatory subunit B, delta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000490777 PPP2R2D-003 ENSG00000175470 9606 + 10:131940159-131956242 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000490777
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000490777 1.988±0.00 2.574±0.00 4.762±0.00 4.237±0.00 5.131±0.00 2.663±0.00 3.403±1.93 1.853±0.00 4.000±0.00 8.909±2.57 6.260±1.59 6.800±1.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000478 CIL_000478_0002 CGP 10:131900644-131981931

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000155672 Ppp2r2d-003 protein_coding Mus_musculus 0 1144
ENSMUST00000041097 Ppp2r2d-001 protein_coding Mus_musculus 0 1144
ENSMUST00000136824 Ppp2r2d-007 nonsense_mediated_decay Mus_musculus 0 580
ENSMUST00000174090 Ppp2r2d-008 protein_coding Mus_musculus 0 425
ENSDART00000028983 PPP2R2A (2 of 2)-201 protein_coding Danio_rerio 0 401
ENSDART00000155816 PPP2R2A (2 of 2)-001 protein_coding Danio_rerio 0 401
ENSMUST00000172764 Ppp2r2d-009 nonsense_mediated_decay Mus_musculus 0 233
ENSMUST00000128157 Ppp2r2d-002 retained_intron Mus_musculus 2.94273e-44 183

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