C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: MSH5-SAPCD1 readthrough (NMD candidate)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000491552 MSH5-SAPCD1-004 ENSG00000255152 9606 + 6:31760720-31763144 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENST00000491552
Transcript ID Kidney
ENST00000491552 0.678±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000174603 Msh5-007 nonsense_mediated_decay Mus_musculus 0 466
ENSMUST00000174026 Msh5-003 nonsense_mediated_decay Mus_musculus 0 466
ENSMUST00000097338 Msh5-008 protein_coding Mus_musculus 0 466
ENSMUST00000007250 Msh5-001 protein_coding Mus_musculus 0 466
ENSMUST00000172536 Msh5-005 nonsense_mediated_decay Mus_musculus 0 394

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