C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger and WD repeat domain 2, E3 ubiquitin protein ligase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000491600 RFWD2-007 ENSG00000143207 9606 - 1:176116646-176206440 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076894 Rfwd2-201 protein_coding Mus_musculus 0 664
ENSMUST00000133472 Gm6206-001 processed_pseudogene Mus_musculus 0 643
ENSMUST00000190342 RP23-293C19.3-001 processed_pseudogene Mus_musculus 0 261
ENSMUST00000121699 Gm15065-001 processed_pseudogene Mus_musculus 0 261
ENSMUST00000118977 Gm12647-001 processed_pseudogene Mus_musculus 0 255
ENSMUST00000120979 Gm15861-001 processed_pseudogene Mus_musculus 0 255
ENSMUST00000190923 RP23-133G16.5-001 processed_pseudogene Mus_musculus 0 252
ENSMUST00000189783 RP24-208N6.3-001 unprocessed_pseudogene Mus_musculus 0 244
ENSMUST00000117170 Gm14894-001 processed_pseudogene Mus_musculus 0 244
ENSMUST00000120617 Gm13396-001 processed_pseudogene Mus_musculus 0 244
ENSMUST00000121678 Gm13356-001 processed_pseudogene Mus_musculus 0 235
ENSMUST00000121483 Gm13210-001 processed_pseudogene Mus_musculus 0 235
ENSMUST00000117327 Gm14670-001 processed_pseudogene Mus_musculus 0 228
ENSMUST00000191422 RP24-286I24.2-001 processed_pseudogene Mus_musculus 0 220
ENSMUST00000119446 Gm11794-001 processed_pseudogene Mus_musculus 0 215
ENSMUST00000119290 Gm13475-001 processed_pseudogene Mus_musculus 0 211
ENSMUST00000119659 Gm12433-001 processed_pseudogene Mus_musculus 0 189
ENSMUST00000121711 Gm13419-001 processed_pseudogene Mus_musculus 8e-38 161
ENSMUST00000120750 Gm13801-001 processed_pseudogene Mus_musculus 1e-36 158

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