C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 6206
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133472 Gm6206-001 ENSMUSG00000048949 10090 - X:103163110-103165407 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000133472
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000133472 0.647±0.14 0.218±0.12 0.224±0.13 0.417±0.25 0.381±0.09 0.342±0.20 0.806±0.06 0.492±0.14 0.470±0.11 0.347±0.13 0.256±0.08 0.479±0.27 0.060±0.02 0.960±0.44

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308769 RFWD2-010 protein_coding Homo_sapiens 0 1914
ENST00000367666 RFWD2-003 protein_coding Homo_sapiens 0 1914
ENST00000367667 RFWD2-002 nonsense_mediated_decay Homo_sapiens 0 2087
ENST00000367669 RFWD2-001 protein_coding Homo_sapiens 0 3123
ENST00000428997 RP11-308N19.5-001 processed_pseudogene Homo_sapiens 0 641
ENST00000459744 RFWD2-008 protein_coding Homo_sapiens 0 935
ENST00000461830 RFWD2-004 retained_intron Homo_sapiens 0 484
ENST00000474194 RFWD2-006 nonsense_mediated_decay Homo_sapiens 0 593
ENST00000482305 RFWD2-005 retained_intron Homo_sapiens 2e-22 110
ENST00000491600 RFWD2-007 nonsense_mediated_decay Homo_sapiens 0 643
ENST00000498306 RFWD2-009 protein_coding Homo_sapiens 0 660
ENST00000579008 RFWD2P1-001 processed_pseudogene Homo_sapiens 0 2235

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