C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: copine family member IX
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000491802 CPNE9-003 ENSG00000144550 9606 + 3:9703833-9705033 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENST00000491802
Transcript ID Heart
ENST00000491802 0.127±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WG CIL_0002WG_0001 CGP 3:9649433-9729908
CIL_00035Z CIL_00035Z_0001 CGP 3:9703807-9748018

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000128148 Cpne9-007 processed_transcript Mus_musculus 0 263
ENSMUST00000130191 Cpne9-003 nonsense_mediated_decay Mus_musculus 0 244
ENSMUST00000132372 Cpne9-002 retained_intron Mus_musculus 0 244
ENSMUST00000041203 Cpne9-001 protein_coding Mus_musculus 0 244
ENSMUST00000138388 Cpne9-008 processed_transcript Mus_musculus 0 241
ENSMUST00000155779 Cpne9-005 processed_transcript Mus_musculus 2.00386e-43 180
ENSMUST00000124574 Cpne9-006 retained_intron Mus_musculus 2.00386e-43 180

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