C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tropomyosin 3 pseudogene 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000492121 TPM3P9-001 ENSG00000241015 9606 + 19:53441863-53442607 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENST00000492121
Transcript ID Liver
ENST00000492121 1.299±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029549 Tpm3-003 protein_coding Mus_musculus 0 913
ENSMUST00000072359 Tpm3-rs7-201 protein_coding Mus_musculus 0 907
ENSMUST00000062193 Tpm3-201 protein_coding Mus_musculus 0 785
ENSMUST00000119570 Tpm3-001 protein_coding Mus_musculus 0 785
ENSMUST00000119158 Tpm3-005 protein_coding Mus_musculus 0 651
ENSMUST00000118566 Tpm3-004 protein_coding Mus_musculus 0 651
ENSMUST00000121503 Tpm3-002 protein_coding Mus_musculus 0 523
ENSMUST00000131354 Tpm3-006 retained_intron Mus_musculus 0 501
ENSMUST00000147430 Tpm3-011 retained_intron Mus_musculus 0 501
ENSMUST00000149432 Tpm3-007 protein_coding Mus_musculus 0 375
ENSMUST00000116350 Tpm3-rs2-001 processed_pseudogene Mus_musculus 0 370
ENSMUST00000133361 Tpm3-013 retained_intron Mus_musculus 0 350
ENSMUST00000133281 Tpm3-010 retained_intron Mus_musculus 0 350
ENSMUST00000149734 Tpm3-014 retained_intron Mus_musculus 0 250
ENSMUST00000149115 Tpm3-009 retained_intron Mus_musculus 0 250
ENSMUST00000151798 Tpm3-012 retained_intron Mus_musculus 0 224
ENSMUST00000127955 Tpm3-008 protein_coding Mus_musculus 9.99995e-41 171

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