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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 28 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000492269  |
NPM1P28-001 |
ENSG00000240804 |
9606 | - |
3:147590996-147591835  |
processed_pseudogene |
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007JF | CIL_0007JF_0001 | UCNEbase | 3:146747615-148369526 |
| CIL_00092K | CIL_00092K_0001 | VISTA | 3:147012442-147613983 |
| CIL_00092J | CIL_00092J_0001 | VISTA | 3:147031749-147633313 |
| CIL_0008O7 | CIL_0008O7_0001 | VISTA | 3:147107359-147708549 |
| CIL_0009D8 | CIL_0009D8_0001 | VISTA | 3:147360760-147962816 |
| CIL_0009BL | CIL_0009BL_0001 | VISTA | 3:147375234-147976562 |
| CIL_000841 | CIL_000841_0001 | VISTA | 3:147545622-148148817 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000164523
|
Gm5611-201 | protein_coding | Mus_musculus | 0 | 601 |
|
ENSMUST00000118871
|
Gm15484-001 | processed_pseudogene | Mus_musculus | 0 | 580 |
|
ENSMUST00000118047
|
Gm14681-001 | processed_pseudogene | Mus_musculus | 0 | 324 |
|
ENSMUST00000075641
|
Npm1-001 | protein_coding | Mus_musculus | 0 | 313 |
|
ENSMUST00000093201
|
Npm1-006 | protein_coding | Mus_musculus | 0 | 200 |
|
ENSMUST00000141881
|
Npm1-004 | processed_transcript | Mus_musculus | 3e-32 | 143 |
