C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein S18B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025305 Mrps18b-001 ENSMUSG00000024436 10090 - 17:35910379-35916389 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025305
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025305 51.433±4.58 52.490±9.51 56.218±13.05 43.920±7.85 46.374±7.30 37.668±2.60 56.678±5.83 51.326±11.68 18.802±1.49 26.722±1.04 40.810±7.51 95.062±19.00 53.143±2.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0002 VISTA 17:35419853-36021785

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005634 IEA nucleus
GO:0005739 IDA mitochondrion
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0030054 IEA cell junction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259873 MRPS18B-001 protein_coding Homo_sapiens 0 669
ENST00000327800 MRPS18B-001 protein_coding Homo_sapiens 0 669
ENST00000400594 MRPS18B-003 protein_coding Homo_sapiens 0 202
ENST00000412451 MRPS18B-001 protein_coding Homo_sapiens 0 669
ENST00000412843 MRPS18B-003 protein_coding Homo_sapiens 0 202
ENST00000418070 MRPS18B-003 protein_coding Homo_sapiens 0 202
ENST00000426945 MRPS18B-001 protein_coding Homo_sapiens 0 669
ENST00000428224 MRPS18B-003 protein_coding Homo_sapiens 0 202
ENST00000430402 MRPS18B-001 protein_coding Homo_sapiens 0 669
ENST00000434310 MRPS18BP2-001 processed_pseudogene Homo_sapiens 0 496
ENST00000437247 MRPS18B-003 protein_coding Homo_sapiens 0 202
ENST00000440992 MRPS18B-003 protein_coding Homo_sapiens 0 202
ENST00000451032 MRPS18B-001 protein_coding Homo_sapiens 0 669
ENST00000454427 MRPS18B-001 protein_coding Homo_sapiens 0 669
ENST00000460640 MRPS18B-002 retained_intron Homo_sapiens 0 473
ENST00000464426 MRPS18B-002 retained_intron Homo_sapiens 0 473
ENST00000468755 MRPS18B-005 processed_transcript Homo_sapiens 0 586
ENST00000469397 MRPS18B-005 processed_transcript Homo_sapiens 0 586
ENST00000469706 MRPS18B-002 retained_intron Homo_sapiens 0 473
ENST00000472229 MRPS18B-005 processed_transcript Homo_sapiens 0 586
ENST00000472267 MRPS18B-002 retained_intron Homo_sapiens 0 473
ENST00000472444 MRPS18B-005 processed_transcript Homo_sapiens 0 586
ENST00000473020 MRPS18B-004 retained_intron Homo_sapiens 0 285
ENST00000476123 MRPS18B-002 retained_intron Homo_sapiens 0 473
ENST00000477010 MRPS18B-005 processed_transcript Homo_sapiens 0 586
ENST00000481158 MRPS18B-002 retained_intron Homo_sapiens 0 473
ENST00000482488 MRPS18B-004 retained_intron Homo_sapiens 0 285
ENST00000482773 MRPS18B-004 retained_intron Homo_sapiens 0 285
ENST00000483109 MRPS18B-004 retained_intron Homo_sapiens 0 285
ENST00000489289 MRPS18B-005 processed_transcript Homo_sapiens 0 586
ENST00000492316 MRPS18B-004 retained_intron Homo_sapiens 0 285
ENST00000493769 MRPS18B-005 processed_transcript Homo_sapiens 0 586
ENST00000495921 MRPS18B-004 retained_intron Homo_sapiens 0 285
ENST00000497082 MRPS18B-004 retained_intron Homo_sapiens 0 285
ENST00000498459 MRPS18B-002 retained_intron Homo_sapiens 0 473

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