C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial ribosomal protein S18B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174807 Mrps18b-005 ENSMUSG00000024436 10090 - 17:35910386-35916330 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENSMUST00000174807
Transcript ID Ovary Placenta Testis
ENSMUST00000174807 29.063±0.00 63.303±9.38 27.105±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090O CIL_00090O_0002 VISTA 17:35419853-36021785

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005739 IDA mitochondrion
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259873 MRPS18B-001 protein_coding Homo_sapiens 0 361
ENST00000327800 MRPS18B-001 protein_coding Homo_sapiens 0 361
ENST00000400594 MRPS18B-003 protein_coding Homo_sapiens 0 202
ENST00000412451 MRPS18B-001 protein_coding Homo_sapiens 0 361
ENST00000412843 MRPS18B-003 protein_coding Homo_sapiens 0 202
ENST00000418070 MRPS18B-003 protein_coding Homo_sapiens 0 202
ENST00000426945 MRPS18B-001 protein_coding Homo_sapiens 0 361
ENST00000428224 MRPS18B-003 protein_coding Homo_sapiens 0 202
ENST00000430402 MRPS18B-001 protein_coding Homo_sapiens 0 361
ENST00000434310 MRPS18BP2-001 processed_pseudogene Homo_sapiens 0 257
ENST00000437247 MRPS18B-003 protein_coding Homo_sapiens 0 202
ENST00000440992 MRPS18B-003 protein_coding Homo_sapiens 0 202
ENST00000451032 MRPS18B-001 protein_coding Homo_sapiens 0 361
ENST00000454427 MRPS18B-001 protein_coding Homo_sapiens 0 361
ENST00000460640 MRPS18B-002 retained_intron Homo_sapiens 1e-38 165
ENST00000464426 MRPS18B-002 retained_intron Homo_sapiens 1e-38 165
ENST00000468755 MRPS18B-005 processed_transcript Homo_sapiens 0 278
ENST00000469397 MRPS18B-005 processed_transcript Homo_sapiens 0 278
ENST00000469706 MRPS18B-002 retained_intron Homo_sapiens 1e-38 165
ENST00000472229 MRPS18B-005 processed_transcript Homo_sapiens 0 278
ENST00000472267 MRPS18B-002 retained_intron Homo_sapiens 1e-38 165
ENST00000472444 MRPS18B-005 processed_transcript Homo_sapiens 0 278
ENST00000473020 MRPS18B-004 retained_intron Homo_sapiens 0 285
ENST00000476123 MRPS18B-002 retained_intron Homo_sapiens 1e-38 165
ENST00000477010 MRPS18B-005 processed_transcript Homo_sapiens 0 278
ENST00000481158 MRPS18B-002 retained_intron Homo_sapiens 1e-38 165
ENST00000482488 MRPS18B-004 retained_intron Homo_sapiens 0 285
ENST00000482773 MRPS18B-004 retained_intron Homo_sapiens 0 285
ENST00000483109 MRPS18B-004 retained_intron Homo_sapiens 0 285
ENST00000489289 MRPS18B-005 processed_transcript Homo_sapiens 0 278
ENST00000492316 MRPS18B-004 retained_intron Homo_sapiens 0 285
ENST00000493769 MRPS18B-005 processed_transcript Homo_sapiens 0 278
ENST00000495921 MRPS18B-004 retained_intron Homo_sapiens 0 285
ENST00000497082 MRPS18B-004 retained_intron Homo_sapiens 0 285
ENST00000498459 MRPS18B-002 retained_intron Homo_sapiens 1e-38 165

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