C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: retinoblastoma binding protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000492348 RBBP4-019 ENSG00000162521 9606 + 1:32651217-32680204 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000492348
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000492348 16.049±0.00 20.099±0.00 3.096±0.00 13.967±7.24 14.743±5.84 13.991±7.93 7.960±3.97 15.538±9.13 7.133±0.32 13.542±6.15 20.959±0.00 17.514±4.66 13.446±4.44 40.587±1.64

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102598 Rbbp4-001 protein_coding Mus_musculus 0 1247
ENSMUST00000188426 RP24-459N9.1-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000135585 Rbbp4-002 protein_coding Mus_musculus 0 233
ENSMUST00000147183 Rbbp4-003 retained_intron Mus_musculus 0 233
ENSMUST00000140291 Rbbp4-004 processed_transcript Mus_musculus 0 231

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