C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: HECT and RLD domain containing E3 ubiquitin protein ligase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000492996 HERC4-006 ENSG00000148634 9606 - 10:68067689-68075283 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungMuscleENST00000492996
Transcript ID Lung Muscle
ENST00000492996 0.724±0.00 0.828±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IBA ubiquitin-protein transferase activity
GO:0005634 IBA nucleus
GO:0005737 IBA cytoplasm
GO:0007283 ISS spermatogenesis
GO:0016874 IEA ligase activity
GO:0030154 IEA cell differentiation
GO:0042787 IBA protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020258 Herc4-201 protein_coding Mus_musculus 0 453
ENSMUST00000135399 Usp16-007 retained_intron Mus_musculus 0.00000003 66
ENSMUST00000140926 Mpnd-003 retained_intron Mus_musculus 0.0002 53

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