C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CUB and Sushi multiple domains 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000493303 CSMD3-005 ENSG00000164796 9606 - 8:113309205-113436790 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungMuscleOvaryPlacentaENST00000493303
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Muscle Ovary Placenta
ENST00000493303 0.022±0.00 0.028±0.00 0.016±0.00 0.026±0.00 0.011±0.00 0.012±0.00 0.019±0.00 0.134±0.00 0.002±0.00 0.006±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RS CIL_0005RS_0001 CGP 8:109963645-113437099
CIL_0005RP CIL_0005RP_0001 CGP 8:112222928-115809673

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100670 Csmd3-201 protein_coding Mus_musculus 0 547
ENSMUST00000160655 Csmd3-002 retained_intron Mus_musculus 0 547
ENSMUST00000160716 Csmd3-003 processed_transcript Mus_musculus 0 547
ENSMUST00000162830 Csmd3-001 protein_coding Mus_musculus 0 547
ENSMUST00000160658 Csmd3-004 protein_coding Mus_musculus 0 547

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