C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cathepsin A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000493522 CTSA-008 ENSG00000064601 9606 + 20:45892961-45897794 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyOvaryENST00000493522
Transcript ID Bladder Brain Colon Kidney Ovary
ENST00000493522 15.311±0.00 7.605±0.00 7.631±0.00 5.339±0.00 10.811±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000RY CIL_0000RY_0001 CGP 20:45886489-45891287
CIL_0006GL CIL_0006GL_0001 CGP 20:45888625-45898820
CIL_0006IQ CIL_0006IQ_0002 CGP 20:45890144-45912155

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000017904 Ctsa-201 protein_coding Mus_musculus 0 710
ENSMUST00000103092 Ctsa-001 protein_coding Mus_musculus 0 710
ENSMUST00000103093 Ctsa-011 protein_coding Mus_musculus 0 710
ENSMUST00000133077 Ctsa-005 retained_intron Mus_musculus 0 303
ENSMUST00000143780 Ctsa-004 protein_coding Mus_musculus 0 259
ENSMUST00000152721 Ctsa-013 protein_coding Mus_musculus 0 220
ENSMUST00000128596 Ctsa-008 retained_intron Mus_musculus 0 211
ENSMUST00000143293 Ctsa-007 processed_transcript Mus_musculus 3e-37 159

Loading