C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: U2 snRNP-associated SURP domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000493782 U2SURP-006 ENSG00000163714 9606 + 3:143001524-143016888 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonLiverLungENST00000493782
Transcript ID Bladder Brain Colon Liver Lung
ENST00000493782 9.600±0.00 16.449±0.00 17.522±0.00 21.196±0.00 22.803±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000191213 U2surp-009 nonsense_mediated_decay Mus_musculus 0 791
ENSMUST00000079659 U2surp-002 protein_coding Mus_musculus 0 754
ENSMUST00000185515 U2surp-005 protein_coding Mus_musculus 0 566
ENSMUST00000078374 U2surp-001 protein_coding Mus_musculus 0 361
ENSMUST00000190019 U2surp-006 protein_coding Mus_musculus 0 254
ENSMUST00000186076 U2surp-004 retained_intron Mus_musculus 5.99756e-43 178
ENSMUST00000188017 U2surp-008 retained_intron Mus_musculus 3e-21 106

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