C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: surfeit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000495524 SURF2-002 ENSG00000148291 9606 + 9:133356578-133360107 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonOvaryENST00000495524
Transcript ID Colon Ovary
ENST00000495524 0.659±0.00 0.611±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DK CIL_0006DK_0001 CGP 9:133348214-133356676
CIL_0006DJ CIL_0006DJ_0001 CGP 9:133351755-133361169
CIL_0006DE CIL_0006DE_0001 CGP 9:133356552-133376166

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000125408 Surf2-005 processed_transcript Mus_musculus 0 191
ENSMUST00000015017 Surf2-001 protein_coding Mus_musculus 0 191
ENSMUST00000157066 Surf2-003 processed_transcript Mus_musculus 1e-35 154
ENSMUST00000135506 Surf2-006 retained_intron Mus_musculus 5e-29 132
ENSMUST00000143098 Surf2-004 processed_transcript Mus_musculus 2e-28 130
ENSMUST00000126947 Surf2-002 processed_transcript Mus_musculus 2e-28 130

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