C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase-like A domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000495827 PTPLAD2-001 ENSG00000188921 9606 - 9:20999515-21031636 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000495827
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000495827 0.351±0.00 0.335±0.00 0.333±0.00 0.298±0.17 0.492±0.00 1.182±0.42 0.237±0.01 0.242±0.12 0.735±0.62 1.793±0.16 0.088±0.00 0.818±0.45 1.281±0.32 0.573±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007D1 CIL_0007D1_0001 CGP 9:20658309-21031636
CIL_00074B CIL_00074B_0001 CGP 9:20999515-21077963

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0006633 IEA fatty acid biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0016829 IEA lyase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030221 Ptplad2-201 protein_coding Mus_musculus 0 737
ENSMUST00000151280 Ptplad2-001 protein_coding Mus_musculus 0 737
ENSMUST00000132493 Ptplad2-002 protein_coding Mus_musculus 0 688

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