C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase-like A domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151280 Ptplad2-001 ENSMUSG00000028497 10090 - 4:88410341-88438928 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000151280
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000151280 4.086±1.26 6.540±0.16 1.453±0.57 3.135±0.38 1.954±0.34 1.524±0.07 2.352±0.00 1.579±0.12 3.698±0.00 0.536±0.11 3.105±0.70 1.643±1.33 0.655±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UZ CIL_0005UZ_0003 CGP 4:87769925-88411011
CIL_0007D1 CIL_0007D1_0002 CGP 4:88094629-88438928
CIL_00074B CIL_00074B_0002 CGP 4:88396144-88522774

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005783 IEA endoplasmic reticulum
GO:0006633 IEA fatty acid biosynthetic process
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0016829 IEA lyase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338382 FOCAD-201 protein_coding Homo_sapiens 8e-26 124
ENST00000380249 FOCAD-001 protein_coding Homo_sapiens 8e-26 124
ENST00000495827 PTPLAD2-001 protein_coding Homo_sapiens 0 737
ENST00000605086 FOCAD-002 protein_coding Homo_sapiens 6e-26 124

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