C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0007D1_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000188352-ENSG00000188921 | CGP | 9606 | 9:20658309-21031636  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000188352  (FOCAD)focadhesin |
ENST00000338382 (FOCAD-201)
|
20715321-20995955 | protein_coding | |
|
ENST00000380249 (FOCAD-001)
|
20658309-20995955 | protein_coding | ||
|
ENST00000603044 (FOCAD-012)
|
20927765-20946731 | protein_coding | ||
|
ENST00000603492 (FOCAD-009)
|
20789334-20823049 | processed_transcript | ||
|
ENST00000603552 (FOCAD-010)
|
20881906-20885529 | processed_transcript | ||
|
ENST00000603610 (FOCAD-016)
|
20896971-20912908 | processed_transcript | ||
|
ENST00000603631 (FOCAD-015)
|
20952420-20981461 | processed_transcript | ||
|
ENST00000603648 (FOCAD-003)
|
20820389-20865967 | nonsense_mediated_decay | ||
|
ENST00000603695 (FOCAD-014)
|
20928944-20944717 | protein_coding | ||
|
ENST00000603844 (FOCAD-004)
|
20822993-20863147 | processed_transcript | ||
|
ENST00000604036 (FOCAD-008)
|
20683978-20720421 | processed_transcript | ||
|
ENST00000604103 (FOCAD-007)
|
20726351-20770133 | processed_transcript | ||
|
ENST00000604254 (FOCAD-013)
|
20927802-20948394 | protein_coding | ||
|
ENST00000604828 (FOCAD-005)
|
20873843-20875815 | processed_transcript | ||
|
ENST00000605031 (FOCAD-006)
|
20726286-20770112 | processed_transcript | ||
|
ENST00000605086 (FOCAD-002)
|
20820294-20995948 | protein_coding | ||
|
ENST00000605852 (FOCAD-011)
|
20872807-20907202 | processed_transcript | ||
|
ENSG00000188921 (PTPLAD2) protein tyrosine phosphatase-like A domain containing 2 |
ENST00000488436 (PTPLAD2-002)
|
21015137-21026745 | processed_transcript | |
|
ENST00000495827 (PTPLAD2-001)
|
20999515-21031636 | protein_coding | ||
|
ENSG00000227071 (FOCAD-AS1) FOCAD antisense RNA 1 |
ENST00000439876 (FOCAD-AS1-001)
|
20683304-20684688 | lincRNA | |
|
ENST00000445051 (FOCAD-AS1-002)
|
20683389-20683938 | lincRNA | ||
| CIL_0007D1_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000038368-ENSMUSG00000028497 | CGP | 10090 | 4:88094629-88438928 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000028497 (Ptplad2) protein tyrosine phosphatase-like A domain containing 2 |
ENSMUST00000030221 (Ptplad2-201)
|
88412930-88438926 | protein_coding | |
|
ENSMUST00000132493 (Ptplad2-002)
|
88396144-88438915 | protein_coding | ||
|
ENSMUST00000151280 (Ptplad2-001)
|
88410341-88438928 | protein_coding | ||
|
ENSMUSG00000038368 (Focad) focadhesin |
ENSMUST00000097992 (Focad-001)
|
88094630-88411006 | protein_coding | |
|
ENSMUST00000107147 (Focad-004)
|
88400565-88411011 | protein_coding | ||
|
ENSMUST00000107148 (Focad-003)
|
88345367-88411009 | retained_intron | ||
|
ENSMUST00000129967 (Focad-002)
|
88094629-88121812 | retained_intron | ||
|
ENSMUST00000130603 (Focad-007)
|
88303137-88326235 | retained_intron | ||
|
ENSMUST00000144388 (Focad-006)
|
88287635-88303630 | processed_transcript | ||
|
ENSMUST00000147527 (Focad-005)
|
88124436-88154720 | retained_intron | ||
|
ENSMUST00000159342 (Focad-009)
|
88121299-88411004 | protein_coding | ||
|
ENSMUST00000161058 (Focad-008)
|
88094645-88183044 | retained_intron | ||
|
ENSMUST00000162039 (Focad-010)
|
88400350-88407219 | processed_transcript | ||
|
ENSMUSG00000081818 (Gm12652) predicted gene 12652 |
ENSMUST00000118329 (Gm12652-001)
|
88255914-88256251 | processed_pseudogene | |
|
ENSMUSG00000082597 (Gm12645) predicted gene 12645 |
ENSMUST00000117297 (Gm12645-001)
|
88151696-88151970 | processed_pseudogene | |
Expression Patterns
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