C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: major histocompatibility complex, class II, DQ alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000496318 HLA-DQA1-007 ENSG00000196735 9606 + 6:32637406-32642981 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000496318
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000496318 5.373±0.00 19.121±0.00 2.867±0.00 2.378±1.84 17.621±8.89 0.437±0.00 3.511±2.49 7.671±3.12 2.044±1.40 63.251±14.60 3.481±0.95 6.284±3.57 5.665±2.18 3.060±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002XS CIL_0002XS_0008 CGP 6:32552990-32647062
CIL_0001PL CIL_0001PL_0006 CGP 6:32628179-32668383

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002504 IEA antigen processing and presentation of peptide or polysaccharide antigen via MHC class II
GO:0005515 IEA protein binding
GO:0006955 IEA immune response
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0019882 IEA antigen processing and presentation
GO:0042613 IEA MHC class II protein complex

Homologs

No Homologs available.

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