C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 4A2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000496382 EIF4A2-027 ENSG00000156976 9606 + 3:186787776-186789477 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyLiverLungMuscleENST00000496382
Transcript ID Brain Colon Kidney Liver Lung Muscle
ENST00000496382 285.435±85.24 193.898±0.00 79.926±3.82 146.241±0.00 116.762±0.00 100.265±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LA CIL_0008LA_0001 VISTA 3:186647123-187250687
CIL_000042 CIL_000042_0001 CGP 3:186717276-186789900
CIL_000041 CIL_000041_0001 CGP 3:186783205-186807058

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168891 Eif4a2-201 protein_coding Mus_musculus 0 678
ENSMUST00000115341 Eif4a2-014 protein_coding Mus_musculus 0 678
ENSMUST00000131871 Eif4a2-006 nonsense_mediated_decay Mus_musculus 0 678
ENSMUST00000147117 Eif4a2-005 nonsense_mediated_decay Mus_musculus 0 678
ENSMUST00000023599 Eif4a2-001 protein_coding Mus_musculus 0 678
ENSMUST00000077605 Eif4a2-002 protein_coding Mus_musculus 0 571
ENSMUST00000123413 Eif4a2-003 nonsense_mediated_decay Mus_musculus 0 562
ENSMUST00000187168 Eif4a2-202 protein_coding Mus_musculus 1e-24 117
ENSMUST00000144493 Eif4a2-020 retained_intron Mus_musculus 1e-24 117
ENSMUST00000148085 Eif4a2-016 retained_intron Mus_musculus 1e-24 117
ENSMUST00000150117 Eif4a2-004 retained_intron Mus_musculus 1e-24 117

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