C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pantothenate kinase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000497424 PANK2-001 ENSG00000125779 9606 + 20:3888839-3926958 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyOvaryENST00000497424
Transcript ID Bladder Brain Breast Colon Heart Kidney Ovary
ENST00000497424 0.634±0.00 3.233±0.00 1.420±0.44 0.693±0.00 1.052±0.00 1.415±1.00 2.666±0.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00067O CIL_00067O_0002 CGP 20:3846799-3929882
CIL_0004LL CIL_0004LL_0001 CGP 20:3888839-4015582

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004594 IEA pantothenate kinase activity
GO:0005524 IEA ATP binding
GO:0005758 TAS mitochondrial intermembrane space
GO:0006766 TAS vitamin metabolic process
GO:0006767 TAS water-soluble vitamin metabolic process
GO:0008219 IEA cell death
GO:0009108 TAS coenzyme biosynthetic process
GO:0015937 IEA coenzyme A biosynthetic process
GO:0015939 TAS pantothenate metabolic process
GO:0016310 IEA phosphorylation
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000138509 Pank2-005 processed_transcript Mus_musculus 0 1607
ENSMUST00000150843 Pank2-001 protein_coding Mus_musculus 0 1607
ENSMUST00000131779 Pank2-002 processed_transcript Mus_musculus 0 1173
ENSMUST00000184105 Pank2-003 nonsense_mediated_decay Mus_musculus 0 1077
ENSMUST00000145904 Pank2-007 protein_coding Mus_musculus 0 532
ENSMUST00000183349 Pank2-008 nonsense_mediated_decay Mus_musculus 0 446
ENSMUST00000184932 Pank2-004 nonsense_mediated_decay Mus_musculus 0 442
ENSMUST00000183388 Pank2-006 nonsense_mediated_decay Mus_musculus 0 313

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