C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000498082 CABP1-005 ENSG00000157782 9606 + 12:120658976-120662414 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastKidneyLiverMuscleOvaryPlacentaTestisENST00000498082
Transcript ID Adipose Adrenal Bladder Brain Breast Kidney Liver Muscle Ovary Placenta Testis
ENST00000498082 0.057±0.00 0.076±0.00 0.424±0.00 4.758±0.00 0.138±0.00 0.324±0.00 0.013±0.00 0.023±0.00 0.082±0.01 0.017±0.00 0.365±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZA CIL_0007ZA_0001 VISTA 12:120240385-120840841

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000151775 Cabp1-005 processed_transcript Mus_musculus 0 346
ENSMUST00000145197 Cabp1-002 nonsense_mediated_decay Mus_musculus 0 346
ENSMUST00000112112 Cabp1-003 protein_coding Mus_musculus 0 346
ENSMUST00000112109 Cabp1-006 protein_coding Mus_musculus 0 346
ENSMUST00000112113 Cabp1-004 protein_coding Mus_musculus 0 346
ENSMUST00000031519 Cabp1-001 protein_coding Mus_musculus 0 346
ENSDART00000018528 cabp5a-201 protein_coding Danio_rerio 4e-36 158
ENSDART00000144067 cabp5a-001 protein_coding Danio_rerio 4e-36 158

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