C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ubiquitin specific peptidase 54
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000498143 USP54-001 ENSG00000166348 9606 - 10:73518722-73576337 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartMuscleENST00000498143
Transcript ID Heart Muscle
ENST00000498143 1.210±0.00 6.637±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00008Z CIL_00008Z_0001 CGP 10:73436428-73625953
CIL_0000Q5 CIL_0000Q5_0002 CGP 10:73497538-73641757

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000127342 Usp54-002 retained_intron Mus_musculus 0 1600
ENSMUST00000035340 Usp54-201 protein_coding Mus_musculus 0 1598
ENSMUST00000022356 Usp54-001 protein_coding Mus_musculus 0 1572
ENSMUST00000143267 Usp54-003 retained_intron Mus_musculus 0 1375
ENSMUST00000123287 Usp54-004 protein_coding Mus_musculus 0 881

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