C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00008Z_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000107758-ENSG00000166348 CGP 9606 10:73436428-73625953
GeneTranscriptPositionBiotype
ENSG00000107758 (PPP3CB)
protein phosphatase 3, catalytic subunit, beta isozyme
ENST00000342558 (PPP3CB-002) 73443780-73495996 protein_coding
ENST00000360663 (PPP3CB-001) 73436428-73496001 protein_coding
ENST00000394828 (PPP3CB-201) 73436806-73496024 protein_coding
ENST00000394829 (PPP3CB-202) 73436806-73496024 protein_coding
ENST00000430762 (PPP3CB-003) 73438198-73467619 protein_coding
ENST00000495897 (PPP3CB-004) 73466958-73471577 processed_transcript
ENSG00000207327 (RNU6-883P)
RNA, U6 small nuclear 883, pseudogene
ENST00000384597 (RNU6-883P-201) 73529051-73529157 snRNA
ENSG00000237139 (RP11-137L10.5)
ENST00000450370 (RP11-137L10.5-001) 73537803-73538391 processed_pseudogene
CIL_00008Z_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021816-ENSMUSG00000034235 CGP 10090 14:20499364-20618354
GeneTranscriptPositionBiotype
ENSMUSG00000021816 (Ppp3cb)
protein phosphatase 3, catalytic subunit, beta isoform
ENSMUST00000022355 (Ppp3cb-004) 20500030-20546512 protein_coding
ENSMUST00000159027 (Ppp3cb-001) 20499364-20546573 protein_coding
ENSMUST00000160812 (Ppp3cb-007) 20515448-20520721 retained_intron
ENSMUST00000161332 (Ppp3cb-005) 20520608-20524043 retained_intron
ENSMUST00000161445 (Ppp3cb-003) 20499868-20546547 protein_coding
ENSMUST00000161989 (Ppp3cb-002) 20507671-20546440 protein_coding
ENSMUST00000162107 (Ppp3cb-006) 20509449-20516016 retained_intron
ENSMUST00000162217 (Ppp3cb-008) 20501552-20503770 retained_intron
ENSMUSG00000034235 (Usp54)
ubiquitin specific peptidase 54
ENSMUST00000022356 (Usp54-001) 20548912-20607228 protein_coding
ENSMUST00000035340 (Usp54-201) 20548912-20618354 protein_coding
ENSMUST00000123287 (Usp54-004) 20577180-20586060 protein_coding
ENSMUST00000127342 (Usp54-002) 20583225-20618354 retained_intron
ENSMUST00000143267 (Usp54-003) 20581169-20605330 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00008Z_0001ENSG00000107758ENST00000342558ENST00000360663ENST00000394828ENST00000394829ENST00000430762ENST00000495897ENSG00000207327ENST00000384597ENSG00000237139ENST00000450370CIL_00008Z_0002ENSMUSG00000021816ENSMUST00000022355ENSMUST00000159027ENSMUST00000160812ENSMUST00000161332ENSMUST00000161445ENSMUST00000161989ENSMUST00000162107ENSMUST00000162217ENSMUSG00000034235ENSMUST00000022356ENSMUST00000035340ENSMUST00000123287ENSMUST00000127342ENSMUST00000143267
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00008Z_0001ENSG00000107758ENST00000342558ENST00000360663ENST00000394828ENST00000394829ENSG00000207327ENST00000384597ENSG00000237139ENST00000450370CIL_00008Z_0002ENSMUSG00000021816ENSMUST00000022355ENSMUST00000159027ENSMUST00000161445ENSMUST00000161989ENSMUST00000162217ENSMUSG00000034235ENSMUST00000022356ENSMUST00000035340
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107758 ENST00000342558 N/A 5.536±0.00 N/A N/A N/A N/A N/A 4.513±3.44 5.471±2.60 3.581±0.00 N/A 5.201±0.18 4.394±0.34 13.207±0.00
ENST00000360663 N/A N/A 2.297±0.00 11.132±0.00 N/A 4.654±0.00 1.649±0.00 N/A N/A 4.788±0.00 7.371±0.00 4.857±1.96 N/A N/A
ENST00000394828 9.815±0.00 6.951±0.00 2.627±0.00 N/A 9.017±3.37 18.535±13.12 6.202±0.00 0.659±0.00 9.209±0.00 N/A N/A 5.234±0.64 4.236±1.14 9.661±0.00
ENST00000394829 N/A 4.258±0.00 N/A 46.637±31.96 17.280±0.00 N/A 9.759±7.75 6.353±0.00 3.166±0.00 2.627±0.00 32.776±23.34 5.305±1.53 4.463±1.72 8.540±0.00
ENST00000430762 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000207327 ENST00000384597 N/A N/A N/A 0.540±0.00 N/A N/A 0.686±0.00 N/A N/A N/A N/A N/A N/A 0.453±0.00
ENSG00000237139 ENST00000450370 N/A N/A N/A 0.344±0.00 N/A 0.090±0.00 N/A N/A N/A N/A 0.739±0.00 0.318±0.00 N/A 0.044±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021816 ENSMUST00000022355 4.332±1.27 2.205±0.32 6.688±1.32 8.847±0.87 3.938±1.29 1.873±0.78 2.219±0.50 2.462±0.51 2.392±0.73 3.907±0.99 9.311±0.11 2.511±0.75 3.024±1.02 0.972±0.07
ENSMUST00000159027 N/A 0.602±0.00 N/A 4.056±0.00 N/A N/A N/A N/A 0.891±0.00 N/A N/A N/A N/A N/A
ENSMUST00000160812 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161445 2.553±0.55 N/A 9.628±1.53 19.809±7.77 3.505±1.29 1.068±0.45 5.523±1.90 2.391±0.87 5.816±4.67 2.842±0.88 27.144±9.39 3.003±1.69 4.189±1.62 2.255±0.62
ENSMUST00000161989 3.694±1.31 2.956±0.00 5.416±0.30 11.770±1.23 5.799±1.87 N/A 3.262±0.51 5.628±0.00 11.027±5.23 5.819±0.00 N/A 7.108±1.74 5.494±2.46 1.594±1.09
ENSMUST00000162107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.132±0.00
ENSMUSG00000034235 ENSMUST00000022356 2.931±1.51 3.569±1.05 3.137±1.34 6.913±5.22 1.781±0.44 1.692±0.62 1.521±0.41 3.043±0.70 0.676±0.15 6.273±0.47 0.683±0.15 5.532±2.57 1.374±0.45 2.838±1.57
ENSMUST00000035340 0.840±0.47 0.911±0.00 2.433±0.13 2.876±0.01 0.509±0.00 0.551±0.16 N/A 0.898±0.16 0.366±0.22 2.514±0.86 0.607±0.21 2.398±1.91 1.390±0.87 1.923±0.52
ENSMUST00000123287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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